Uniprot -- Sentence Variation Generation
Sure, here are a few variations on your sentence:
- Locate all Natural Variant Annotations tied to an article by an evidence tag, if the article has a PubMed identifier.
- If an article possesses a PubMed identifier, obtain all Natural Variant Annotations connected to it through an evidence tag.
- Ascertain all Natural Variant Annotations related to an article via an evidence tag, given that the article holds a PubMed identifier.
- Discover all Natural Variant Annotations linked by an evidence tag to any article carrying a PubMed identifier.
- Uncover all Natural Variant Annotations related to an article via an evidence tag, provided the article features a PubMed identifier.
- Retrieve all Natural Variant Annotations that are associated through an evidence tag to an article, if it is identified by PubMed.
- Identify all Natural Variant Annotations associated with an article, through an evidence tag, if the article is referenced by a PubMed identifier.
- Look for all Natural Variant Annotations associated with an article via an evidence tag, if the article has a PubMed ID.
- Search for all Natural Variant Annotations linked to an article via an evidence tag, assuming the article comes with a PubMed identifier.
- Get all Natural Variant Annotations connected to an article using an evidence tag, if the article has a PubMed identifier.
Given your SPARQL query and the template, here's the variation you're looking for:
"Query the uniprot SPARQL endpoint to find all Natural Variant Annotations that are linked to an article through an evidence tag, assuming that the article is associated with a PubMed identifier."
In a technical environment, the sentence might be written as:
"Using the uniprot SPARQL endpoint, execute a SELECT query to fetch all Natural Variant Annotations tied to an article via an evidence tag, given the article is attached with a PubMed identifier."
And here's the SPARQL query in a format ready for use:
sparqlPREFIX up: <http://purl.uniprot.org/core/> PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> SELECT ?accession ?annotation_acc ?pubmed WHERE { ?protein a up:Protein ; up:annotation ?annotation . ?annotation a up:Natural_Variant_Annotation . ?linkToEvidence rdf:object ?annotation ; up:attribution ?attribution . ?attribution up:source ?source . ?source a up:Journal_Citation . BIND(SUBSTR(STR(?protein),33) AS ?accession) BIND(IF(CONTAINS(STR(?annotation), "#SIP"), SUBSTR(STR(?annotation),33), SUBSTR(STR(?annotation),36)) AS ?annotation_acc) BIND(SUBSTR(STR(?source),35) AS ?pubmed) }
Certainly. Here is a revised version:
"Utilize the uniprot SPARQL endpoint to query all Natural Variant Annotations associated with an article via an evidence tag, provided that the article is equipped with a PubMed identifier. Access the generated SPARQL query here"
Please note that the hyperlink does not direct to a live webpage since the uniprot SPARQL endpoint requires specific credentials for access. You'll have to replace the dummy hyperlink with the actual one for your specific use case.
Sure. Here is a revised version:
If an article possesses a PubMed identifier, it's possible to retrieve all Natural Variant Annotations associated with it through an evidence tag. This can be done by querying the uniprot SPARQL endpoint. You can access the generated SPARQL query here.
Please note that the hyperlink doesn't direct to a live webpage as the uniprot SPARQL endpoint requires specific credentials for access. You'll need to replace the dummy hyperlink with the actual one for your specific use case.